|
Name |
Type |
Discontinued? |
|
| 1 |
VIPOR_EXEC_ID |
NUMERIC |
No |
|
|
|
| The unique identifier (.1 item) for the Variant Interpretation Pipeline Orchestrator (VIPOr) record. |
|
|
| 2 |
CONTACT_DATE_REAL |
FLOAT |
No |
|
|
|
| A unique contact date in decimal format. The integer portion of the number indicates the date of contact. The digits after the decimal distinguish different contacts on the same date and are unique for each contact on that date. For example, .00 is the first/only contact, .01 is the second contact, etc. |
|
|
| 3 |
LINE |
INTEGER |
No |
|
|
|
| The line number for the information associated with this contact. Multiple pieces of information can be associated with this contact. |
|
|
| 4 |
SEQ_DOC_ID |
NUMERIC |
No |
|
|
|
| The unique ID of the Genomic Sequencing Document associated with this Variant Interpretation Pipeline Orchestrator (VIPOr) execution. |
|
|
| 5 |
SEQ_DOC_COLUMN_NAME |
VARCHAR |
No |
|
|
|
| The name of the column within the sequencing document that contains the associated sequencing data. This name is required to identify the correct set of sequencing data within the document. |
|
|
| 6 |
ORD_SEQ_DOC_SAMPLE_TYP_C_NAME |
NUMERIC |
No |
|
|
|
| The sample type of the sequencing data within the column of the sequencing document. The sample type does not need to match the sample type listed on the sequencing document record, as a single set of sequencing data might serve a different role if reused in the future for a different test. |
| May contain organization-specific values: No |
| Category Entries: |
| Germline |
| Maternal |
| Paternal |
| Sibling |
| Relative |
| Tumor |
| Paired Tumor/Normal |
| Normal |
| Pending update |
|
|
| 7 |
SEQ_AFFECTED_STATUS_C_NAME |
NUMERIC |
No |
|
|
|
| Whether this sample is from an affected (Yes), unaffected (No), or unknown individual. Blank and unknown will mean that no filtering will apply to that individual. Used by the Variant Interpretation Pipeline Orchestrator (VIPOr) to filter variants for family analysis such as trio studies. |
| May contain organization-specific values: No |
| Category Entries: |
| Yes |
| No |
| Unknown |
|
|